
BCR-ABL Qualitative PCR







The BCR-ABL Qualitative PCR is a molecular test that detects the presence of the BCR-ABL fusion gene, an abnormality related to certain blood cancers like Chronic Myeloid Leukemia (CML) and Philadelphia chromosome– positive Acute Lymphoblastic Leukemia (Ph⁺ ALL). It identifies whether the fusion gene is present in a blood or bone marrow sample and specifies the transcript type (specific form). This helps doctors confirm the diagnosis and decide on the right treatment.









Understanding BCR-ABL Qualitative PCR
The BCR-ABL gene is an abnormal fusion gene formed when parts of the BCR gene on chromosome 22 and the ABL gene on chromosome 9 join together due to a chromosomal translocation, commonly known as the Philadelphia chromosome. This translocation creates an activated protein kinase that causes uncontrolled growth of white blood cells. The Philadelphia chromosome is commonly found in Chronic Myeloid Leukemia (CML) and Acute Lymphoid Leukemia (ALL). The BCR-ABL gene change is seen in over 95% of CML patients, 5% of children with ALL, and 15–30% of adults with ALL.
The BCR-ABL Qualitative PCR test checks if the BCR-ABL gene transcript is present in a patient’s blood or bone marrow. It can also identify the specific type of transcript, such as p210, p190, or p230. This test does not measure how much of the transcript is there; it only confirms whether it is present or absent, helping doctors make an accurate diagnosis.
This test is particularly useful when there are clinical signs of leukemia, such as persistently high white blood cell counts, fatigue, unexplained bruising, or splenomegaly, or when a doctor wants to confirm the presence of the Philadelphia chromosome before initiating targeted therapy with tyrosine kinase inhibitors. It can also be used when previous tests were inconclusive or as a preliminary screening before quantitative monitoring begins.
It is important to provide a brief clinical history or the doctor’s prescription at the time of sample collection. This ensures the laboratory has all necessary patient information for accurate analysis and helps correlate the test findings with the patient’s clinical condition.
Laboratory test results may vary depending on the testing method and platform used. Therefore, lab results should always be interpreted by a qualified hematologist or oncologist, as detection of BCR-ABL requires expert guidance to determine next steps in diagnosis, treatment, or follow-up monitoring. Patients should avoid self-diagnosis or treatment based on results alone.
What does BCR-ABL Qualitative PCR measure?
The BCR-ABL Qualitative PCR test checks a blood or bone marrow sample for the presence or absence of BCR-ABL mRNA transcripts, which are produced due to a chromosomal change called t(9;22), also known as the Philadelphia chromosome. If the test is positive, it can identify the specific transcript type, such as p210 (e13a2/e14a2) or p190 (e1a2), which helps doctors understand the type of leukemia and plan treatment accordingly.





FAQs related to BCR-ABL Qualitative PCR
- Stock W, Yu D, Karrison T, Sher D, Stone RM, Larson RA, Bloomfield CD. Quantitative real-time RT-PCR monitoring of BCR-ABL in chronic myelogenous leukemia shows lack of agreement in blood and bone marrow samples. Int J Oncol. 2006 May;28(5):1099-103. PMID: 16596225. [Accessed 08 Oct. 2025]. Available From:
- Quality Control Methods for Optimal BCR-ABL1 Clinical Testing in Human Whole Blood Samples [Internet]. ScienceDirect; [Accessed 08 Oct. 2025]. Available from:
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